Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_635

Experiment: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9003 and 9004 are separated by 122 nucleotides mRNA_635: 9003 - KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins, at 1,526,583 to 1,528,432 9003 mRNA_636: 9004 - Hypothetical Protein, at 1,528,555 to 1,529,690 9004

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
1,526,021 - +0.1
1,526,327 + +0.3
1,526,875 - 9003 mRNA_635 0.16 +0.0
1,527,006 - 9003 mRNA_635 0.23 -2.2
1,527,037 + 9003 mRNA_635 0.25 -1.7
1,527,205 + 9003 mRNA_635 0.34 -0.3
1,527,950 + 9003 mRNA_635 0.74 -1.2
1,528,088 - 9003 mRNA_635 0.81 +0.9
1,528,358 + -1.7
1,528,367 + -1.2
1,528,368 + -2.4
1,528,481 - +1.4
1,528,492 + +2.4
1,528,498 - -0.8
1,528,502 + -0.0
1,528,517 + -0.1
1,528,643 + +0.0
1,528,779 - 9004 mRNA_636 0.20 +1.8
1,528,782 - 9004 mRNA_636 0.20 +0.4
1,528,807 + 9004 mRNA_636 0.22 +0.4
1,528,820 + 9004 mRNA_636 0.23 +1.6
1,528,955 - 9004 mRNA_636 0.35 +0.2

Or see this region's nucleotide sequence