Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_937

Experiment: YNB Glucose 75mM Methionine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9305 and 9306 are separated by 456 nucleotides mRNA_937: 9305 - KOG1721 FOG Zn-finger, at 19,341 to 20,725 9305 mRNA_938: 9306 - Hypothetical Protein, at 21,182 to 22,697 9306

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
remove
18,343 - +0.4
18,347 + +2.5
18,349 + -1.5
18,359 + -0.2
18,361 + -0.1
18,460 - -2.1
18,486 - +0.0
18,492 - +0.4
18,511 - +0.2
18,621 - +2.4
18,621 - -0.1
18,725 - +1.6
18,735 + +0.1
18,750 - +0.9
18,765 - -0.3
18,774 - -0.2
18,779 - +0.9
18,941 + +2.0
18,954 - +0.1
19,070 + -0.3
19,188 - +1.6
19,201 - -0.5
19,220 + +0.9
19,226 + +0.2
19,228 - -0.9
19,231 + +1.8
19,240 - -0.2
19,327 + +0.8
19,382 - -1.0
19,795 - 9305 mRNA_937 0.33 +0.4
19,849 - 9305 mRNA_937 0.37 -0.2
19,970 + 9305 mRNA_937 0.45 +0.7
20,041 - 9305 mRNA_937 0.51 +1.3
20,204 - 9305 mRNA_937 0.62 +0.9
20,491 - 9305 mRNA_937 0.83 +0.0
20,492 - 9305 mRNA_937 0.83 -1.0
20,494 + 9305 mRNA_937 0.83 -0.6
21,006 + +1.7
21,108 + +0.2
21,266 + -0.3
21,305 - +2.6
21,436 + 9306 mRNA_938 0.17 +0.5
21,543 - 9306 mRNA_938 0.24 +1.4
21,568 - 9306 mRNA_938 0.25 +0.5
21,587 - 9306 mRNA_938 0.27 -0.6
21,588 + 9306 mRNA_938 0.27 -0.6

Or see this region's nucleotide sequence