Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_976

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9344 and 9345 are separated by 362 nucleotides mRNA_976: 9344 - SUPERFAMILY--SSF54928, at 118,269 to 121,735 9344 mRNA_977: 9345 - KOG1378 Purple acid phosphatase, at 122,098 to 123,952 9345

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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117,723 - +1.3
117,761 - -0.8
118,027 - +0.7
118,502 - +0.3
118,508 - -1.3
118,512 - -0.6
118,531 + +0.4
118,638 + 9344 mRNA_976 0.11 +1.1
118,806 + 9344 mRNA_976 0.15 +0.7
118,948 + 9344 mRNA_976 0.20 -0.0
119,066 + 9344 mRNA_976 0.23 +1.9
119,097 + 9344 mRNA_976 0.24 +1.0
119,215 - 9344 mRNA_976 0.27 -0.5
119,297 - 9344 mRNA_976 0.30 -2.0
119,414 + 9344 mRNA_976 0.33 +0.5
119,613 + 9344 mRNA_976 0.39 -0.6
119,869 + 9344 mRNA_976 0.46 +1.3
120,003 + 9344 mRNA_976 0.50 -0.5
120,127 + 9344 mRNA_976 0.54 -0.7
120,172 + 9344 mRNA_976 0.55 +1.2
120,562 - 9344 mRNA_976 0.66 +0.6
120,747 + 9344 mRNA_976 0.71 +1.7
120,854 + 9344 mRNA_976 0.75 -2.8
120,896 - 9344 mRNA_976 0.76 +1.3
121,167 - 9344 mRNA_976 0.84 +0.2
121,184 - 9344 mRNA_976 0.84 +0.3
121,334 - 9344 mRNA_976 0.88 +1.6
121,601 + +0.1
121,628 - -1.2
121,649 - +0.2
121,735 + +0.1
121,950 + -0.7
122,112 - -0.7
122,475 + 9345 mRNA_977 0.20 -0.3
122,600 - 9345 mRNA_977 0.27 +0.2

Or see this region's nucleotide sequence