Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1083

Experiment: YNB Glucose 75mM Methionine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9450 and 9451 are separated by 559 nucleotides mRNA_1082: 9450 - Hypothetical Protein, at 368,387 to 368,641 9450 mRNA_1083: 9451 - Hypothetical Protein, at 369,201 to 370,313 9451

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Methionine
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368,302 - +0.6
368,310 - +0.1
368,331 + +0.2
368,438 - 9450 mRNA_1082 0.20 +0.4
368,439 - 9450 mRNA_1082 0.20 +0.1
368,472 - 9450 mRNA_1082 0.33 +0.3
368,473 - 9450 mRNA_1082 0.34 -1.4
368,505 - 9450 mRNA_1082 0.46 +0.4
368,568 + 9450 mRNA_1082 0.71 +0.6
368,581 - 9450 mRNA_1082 0.76 +1.5
368,608 - 9450 mRNA_1082 0.87 +0.1
368,611 - 9450 mRNA_1082 0.88 -0.5
368,613 + 9450 mRNA_1082 0.89 -0.2
368,649 + +1.7
368,770 + -0.1
368,771 + -0.1
369,221 - +0.7
369,237 + +0.7
369,341 - 9451 mRNA_1083 0.13 +1.9
369,753 - 9451 mRNA_1083 0.50 +1.3
370,476 - +0.2
370,480 + -1.9
370,502 + +1.4
370,621 + -0.3
370,623 + +0.4
370,624 + +0.9
370,638 + -1.8
370,772 - +0.8
370,777 + -1.2
370,794 - +0.1
370,802 + -0.1
370,946 + +0.6
371,219 - +1.2
371,228 + -0.1
371,244 + +1.9

Or see this region's nucleotide sequence