Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1908

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10276 and 10277 are separated by 581 nucleotides mRNA_1908: 10276 - K01426 E3.5.1.4, amiE amidase, at 490,535 to 492,598 10276 mRNA_1909: 10277 - K01426 E3.5.1.4, amiE amidase, at 493,180 to 495,383 10277

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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489,852 - -0.1
490,154 + -1.4
490,351 - +1.3
490,583 - -0.4
490,610 + -0.4
490,619 - -2.3
490,903 + 10276 mRNA_1908 0.18 +0.3
491,306 - 10276 mRNA_1908 0.37 +0.7
491,468 - 10276 mRNA_1908 0.45 +0.1
491,499 - 10276 mRNA_1908 0.47 +0.6
491,956 + 10276 mRNA_1908 0.69 -0.4
492,198 + 10276 mRNA_1908 0.81 -0.8
492,381 + 10276 mRNA_1908 0.89 +1.3
492,681 - -2.2
492,934 + +0.2
493,073 - +0.4
493,219 + -1.9
493,266 + +1.0
493,390 + +0.3
493,540 + 10277 mRNA_1909 0.16 +0.7

Or see this region's nucleotide sequence