Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1985

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10352 and 10353 are separated by 672 nucleotides mRNA_1984: 10352 - Hypothetical Protein, at 670,630 to 671,905 10352 mRNA_1985: 10353 - Hypothetical Protein, at 672,578 to 672,870 10353

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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671,679 - 10352 mRNA_1984 0.82 +0.0
671,735 + 10352 mRNA_1984 0.87 -0.5
672,009 + +1.5
672,154 + -1.0
672,366 + +1.2
672,737 + 10353 mRNA_1985 0.54 -1.2
672,887 + -0.2
673,624 - +1.1
673,653 + +0.3
673,666 - +0.5
673,675 - +0.4
673,759 + +0.0
673,801 + -0.3
673,809 + +1.6
673,812 - +1.1

Or see this region's nucleotide sequence