Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2464

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10831 and 10832 are separated by 775 nucleotides mRNA_2463: 10831 - Hypothetical Protein, at 200,051 to 202,030 10831 mRNA_2464: 10832 - Hypothetical Protein, at 202,806 to 204,474 10832

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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201,958 + +2.5
202,094 + +0.3
202,109 + +0.2
202,117 - -0.5
202,127 - +1.9
202,215 - -0.6
202,218 + +0.6
202,244 - +1.4
202,252 - -0.1
202,255 + +0.1
202,256 - +0.4
202,264 + +0.5
202,266 - -0.4
202,270 - +2.1
202,270 + +0.7
202,279 + -0.4
202,279 - -1.4
202,279 - -0.4
202,282 - +0.1
202,288 + +0.6
202,288 + +1.7
202,328 + -0.5
202,329 - -0.0
202,362 - -2.8
202,376 - -0.4
202,376 - +0.3
202,378 + +0.2
202,378 - +1.1
202,380 - -0.8
202,424 + +1.6
202,427 + -0.7
202,432 - -0.7
202,434 + +1.1
202,439 + -1.7
202,442 - +0.3
202,442 + +0.6
202,444 + +0.2
202,447 + +0.7
202,449 + +2.4
202,450 - -0.0
202,452 + +0.4
202,452 + +1.7
202,458 + +1.5
202,461 - +0.3
202,462 + +2.5
202,465 + -0.0
202,465 - +0.1
202,474 + +0.0
202,476 + -0.2
202,488 + +1.7
202,489 + +2.0
202,491 + -0.0
202,493 + -0.8
202,499 - +0.3
202,501 - +0.6
202,502 + +1.5
202,507 - +1.0
202,520 + -0.4
202,524 + -0.3
202,524 + +1.0
202,525 - -0.1
202,535 - -1.6
202,544 + +2.2
202,546 - -0.9
202,552 - -3.4
202,562 + +0.7
202,580 - +0.5
202,594 + +2.7
202,597 - +0.3
202,625 - +0.2
202,680 - +0.6
202,683 + -0.0
202,695 + +0.6
202,705 - +1.4
202,716 - -1.4
202,730 + +0.2
202,733 - +1.7
202,744 - -1.3
202,769 + -1.2

Or see this region's nucleotide sequence