Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2482

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10850 and 10851 are separated by 146 nucleotides mRNA_2482: 10850 - KOG0712 Molecular chaperone (DnaJ superfamily), at 252,498 to 254,224 10850 mRNA_2483: 10851 - K17541 SCYL2 SCY1-like protein 2, at 254,371 to 257,459 10851

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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251,608 - -0.2
251,918 + +0.8
251,944 - +2.2
252,056 + +0.9
252,057 + +3.3
252,092 - +0.3
252,161 - -0.3
252,187 + +0.2
252,196 - -2.6
252,232 + -0.3
252,258 - +0.5
252,265 - +2.1
252,372 + +0.9
252,372 - +0.1
252,373 - +1.1
252,387 + -1.1
252,826 - 10850 mRNA_2482 0.19 -0.6
253,230 - 10850 mRNA_2482 0.42 +0.0
253,402 - 10850 mRNA_2482 0.52 +0.9
253,412 + 10850 mRNA_2482 0.53 -0.7
253,430 + 10850 mRNA_2482 0.54 +0.7
253,557 - 10850 mRNA_2482 0.61 -0.2
253,684 + 10850 mRNA_2482 0.69 +1.5
253,859 - 10850 mRNA_2482 0.79 +0.3
253,981 - 10850 mRNA_2482 0.86 +2.2
253,986 + 10850 mRNA_2482 0.86 +0.2
253,986 + 10850 mRNA_2482 0.86 +0.7
253,994 - 10850 mRNA_2482 0.87 +2.6
254,036 + 10850 mRNA_2482 0.89 +0.1
254,147 - +0.0
254,149 - -1.2
254,303 + +2.2
254,307 + +2.0
254,318 - +1.2
254,458 - +0.1
254,715 - 10851 mRNA_2483 0.11 +3.3
254,721 - 10851 mRNA_2483 0.11 +0.6
254,742 - 10851 mRNA_2483 0.12 +1.2
254,751 + 10851 mRNA_2483 0.12 +1.6
254,871 + 10851 mRNA_2483 0.16 -0.2
255,057 - 10851 mRNA_2483 0.22 -0.6
255,058 + 10851 mRNA_2483 0.22 -0.5

Or see this region's nucleotide sequence