Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2685

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11052 and 11053 are separated by 762 nucleotides mRNA_2684: 11052 - K02144 ATPeV1H V-type H+-transporting ATPase subunit H, at 775,644 to 777,796 11052 mRNA_2685: 11053 - Hypothetical Protein, at 778,559 to 779,074 11053

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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777,797 + +0.2
777,799 - +1.5
777,812 - +0.1
777,843 + +0.8
777,919 - +1.4
777,954 - -0.6
777,954 - +0.0
777,993 + +1.1
778,011 - +1.2
778,082 - +0.1
778,089 - -0.3
778,126 + +0.8
778,203 + +2.3
778,222 - +0.5
778,233 - +0.4
778,253 - -1.1
778,282 - -0.2
778,306 + +1.1
778,352 - -0.4
778,367 - +0.4
778,426 - -1.0
778,433 - -0.1
778,453 + +1.4
778,487 - -0.5
778,495 - +0.5
778,520 + -0.6
778,538 - -0.5
778,549 - -1.2
778,550 - -0.1
778,590 - +0.9
778,596 + -0.9
778,638 - 11053 mRNA_2685 0.15 -0.8
778,697 + 11053 mRNA_2685 0.27 -2.0
778,714 + 11053 mRNA_2685 0.30 +1.0
778,719 + 11053 mRNA_2685 0.31 -1.0
778,744 - 11053 mRNA_2685 0.36 -0.3
778,761 - 11053 mRNA_2685 0.39 +1.7
778,762 + 11053 mRNA_2685 0.39 -3.0
778,763 + 11053 mRNA_2685 0.40 -0.8
778,786 + 11053 mRNA_2685 0.44 -0.9
778,826 - 11053 mRNA_2685 0.52 -0.1
778,834 - 11053 mRNA_2685 0.53 +0.5
778,838 - 11053 mRNA_2685 0.54 +0.3
778,838 - 11053 mRNA_2685 0.54 +1.1
778,842 - 11053 mRNA_2685 0.55 +1.6
778,847 + 11053 mRNA_2685 0.56 +0.4
778,848 + 11053 mRNA_2685 0.56 -0.1
778,852 - 11053 mRNA_2685 0.57 -0.6
778,853 + 11053 mRNA_2685 0.57 +0.5
778,857 - 11053 mRNA_2685 0.58 +1.9
778,866 - 11053 mRNA_2685 0.59 -3.5
778,869 - 11053 mRNA_2685 0.60 +1.3
778,870 - 11053 mRNA_2685 0.60 -0.6
778,908 + 11053 mRNA_2685 0.68 -0.1
778,913 - 11053 mRNA_2685 0.69 +0.1
778,913 + 11053 mRNA_2685 0.69 -0.2
778,914 + 11053 mRNA_2685 0.69 +0.6
778,935 - 11053 mRNA_2685 0.73 +1.4
778,976 - 11053 mRNA_2685 0.81 +1.8
778,981 + 11053 mRNA_2685 0.82 -3.0
779,004 - 11053 mRNA_2685 0.86 -0.5
779,024 - -0.3
779,027 - +1.0
779,032 - -0.8
779,067 - +1.2
779,094 - +1.7
779,106 + -0.2
779,111 - +0.8
779,116 - +2.1
779,118 - +0.6
779,121 - +2.0
779,122 - -1.3
779,122 + +1.5
779,130 - +1.2
779,135 - +1.0
779,143 - -1.0
779,157 + +0.7
779,159 + +0.7
779,159 + +0.6
779,161 + -0.1
779,161 - +0.6
779,162 + +1.5
779,162 + +0.3
779,163 + -0.1
779,171 - +1.8
779,176 - -0.2
779,179 - +0.1
779,181 - +0.6
779,182 - +1.7
779,183 - +0.4
779,184 - +0.4
779,186 - +1.2

Or see this region's nucleotide sequence