Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2783

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11150 and 11151 are separated by 847 nucleotides mRNA_2782: 11150 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 198,574 to 201,487 11150 mRNA_2783: 11151 - BLAST NADH dehydrogenase (ubiquinone) Fe-S protein 5 [C..., at 202,335 to 202,970 11151

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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201,566 - +0.5
201,864 - +0.7
201,867 - +0.2
201,877 - +1.3
201,878 + -0.4
201,878 + +2.3
201,894 + +0.3
202,018 - +0.2
202,020 + +1.0
202,030 + +1.9
202,038 - -0.2
202,041 + +2.0
202,042 + -0.0
203,023 + +2.8
203,193 - -0.2
203,214 - -0.4
203,217 - -0.3
203,347 - +2.3
203,359 + +0.3
203,359 + +0.3
203,507 - -0.4
203,507 - +1.5
203,512 - +0.7
203,521 + +0.2
203,844 - +0.7

Or see this region's nucleotide sequence