Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4766

Experiment: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13133 and 13134 are separated by 239 nucleotides13134 and 13135 are separated by 322 nucleotides mRNA_4765: 13133 - SUPERFAMILY--SSF52058, at 958,000 to 961,527 13133 mRNA_4766: 13134 - BLAST ribonuclease e [Moniliophthora roreri MCA 2997], at 961,767 to 963,160 13134 mRNA_4767: 13135 - KOG1263 Multicopper oxidases, at 963,483 to 966,203 13135

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
961,166 - 13133 mRNA_4765 0.90 -0.3
961,475 + -0.5
961,563 - +0.3
961,649 + +1.8
961,652 - +1.6
961,909 + 13134 mRNA_4766 0.10 +0.8
961,988 - 13134 mRNA_4766 0.16 +1.6
961,988 - 13134 mRNA_4766 0.16 +0.7
962,424 - 13134 mRNA_4766 0.47 -0.9
962,638 + 13134 mRNA_4766 0.62 +0.5
962,672 + 13134 mRNA_4766 0.65 -0.4
962,697 - 13134 mRNA_4766 0.67 +0.6
962,778 + 13134 mRNA_4766 0.73 +0.2
962,798 - 13134 mRNA_4766 0.74 +0.9
963,076 - +4.1
963,338 - +0.5
963,369 - +1.3
963,735 - -0.9
963,757 + 13135 mRNA_4767 0.10 +0.3
964,145 + 13135 mRNA_4767 0.24 +0.2

Or see this region's nucleotide sequence