Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5381

Experiment: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13748 and 13749 are separated by 255 nucleotides mRNA_5380: 13748 - K17782 MIA40, CHCHD4 mitochondrial intermembrane space import and assembly protein 40, at 596,345 to 597,306 13748 mRNA_5381: 13749 - Hypothetical Protein, at 597,562 to 598,053 13749

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
597,431 + +0.3
597,823 + 13749 mRNA_5381 0.53 -1.0
597,890 + 13749 mRNA_5381 0.67 +1.8
598,013 - +0.5
598,149 - +0.5
598,319 - -0.5
598,320 - +0.3
598,323 + +2.4
598,328 - +0.0
598,334 - -0.4
598,336 + +1.2
598,341 - +0.5
598,428 - -0.2
598,443 + -0.7
598,456 - +2.1
598,595 - -0.3
598,599 + +1.4
598,672 - +0.5
598,753 + +0.5
598,968 + -0.0
599,049 - +0.4

Or see this region's nucleotide sequence