Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5383

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5383: 13751 - Hypothetical Protein, at 612,955 to 613,540 13751

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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612,092 - +1.0
612,289 - +0.5
612,330 - -0.4
612,337 + +0.1
612,437 + +1.5
612,534 + +0.6
612,594 - +0.5
612,617 + +0.7
612,720 - +1.9
612,723 + +0.1
612,723 + -0.3
612,732 + -0.1
612,864 + +0.6
612,873 + +0.3
612,874 - +0.2
612,893 + +1.2
612,899 - -0.2
612,900 + +0.4
612,900 + +2.6
613,033 - 13751 mRNA_5383 0.13 +0.1
613,090 + 13751 mRNA_5383 0.23 +0.9
613,144 - 13751 mRNA_5383 0.32 +0.6
613,169 - 13751 mRNA_5383 0.37 -1.2
613,208 + 13751 mRNA_5383 0.43 +1.5
613,213 + 13751 mRNA_5383 0.44 +1.1
613,275 - 13751 mRNA_5383 0.55 +1.6
613,318 - 13751 mRNA_5383 0.62 +0.9
613,322 + 13751 mRNA_5383 0.63 +0.5
613,395 + 13751 mRNA_5383 0.75 +0.0
613,396 + 13751 mRNA_5383 0.75 +0.0
613,409 + 13751 mRNA_5383 0.77 +1.2
613,419 + 13751 mRNA_5383 0.79 +0.7
613,421 + 13751 mRNA_5383 0.80 -0.7
613,468 - 13751 mRNA_5383 0.88 +2.3
613,478 + 13751 mRNA_5383 0.89 -0.0
613,484 - +2.0
613,494 + +0.8
613,506 + +0.4
613,510 + +0.5
613,513 - -1.8
613,513 + +0.3
613,530 + +2.4
613,533 + -0.0
613,614 - +0.5
613,638 + -1.4
613,638 - -0.4
613,641 - +1.0
613,693 - -0.2
613,700 - +0.3
613,873 + +0.7
613,883 - +0.8
613,902 - +1.2
614,024 - +0.8
614,117 + -0.0
614,135 - -0.7
614,386 - -1.0

Or see this region's nucleotide sequence