Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5393

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5393: 13761 - KOG0603 Ribosomal protein S6 kinase, at 640,505 to 641,434 13761

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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639,654 + -1.7
639,778 - +1.0
639,809 + +0.7
639,844 - +0.5
639,889 - +0.2
639,922 + -0.1
639,964 - -0.2
640,009 - -0.2
640,092 - -0.2
640,184 + +0.3
640,231 + -0.0
640,243 - -0.8
640,251 - -0.6
640,251 + +0.0
640,379 - +0.6
640,386 + -1.2
640,390 - +1.1
640,393 - -1.0
640,611 - 13761 mRNA_5393 0.11 -1.1
640,611 - 13761 mRNA_5393 0.11 +0.4
640,620 - 13761 mRNA_5393 0.12 +2.5
640,680 - 13761 mRNA_5393 0.19 -0.3
640,820 - 13761 mRNA_5393 0.34 -0.5
640,821 - 13761 mRNA_5393 0.34 +0.9
640,839 - 13761 mRNA_5393 0.36 -0.0
640,844 - 13761 mRNA_5393 0.36 -0.6
640,884 - 13761 mRNA_5393 0.41 +1.2
640,899 + 13761 mRNA_5393 0.42 +0.8
640,933 - 13761 mRNA_5393 0.46 -1.3
640,965 - 13761 mRNA_5393 0.49 +0.9
640,980 - 13761 mRNA_5393 0.51 +0.6
640,986 + 13761 mRNA_5393 0.52 -3.0
640,996 + 13761 mRNA_5393 0.53 +0.9
641,085 - 13761 mRNA_5393 0.62 -0.1
641,090 - 13761 mRNA_5393 0.63 -1.2
641,126 - 13761 mRNA_5393 0.67 +1.1
641,147 + 13761 mRNA_5393 0.69 +0.3
641,148 - 13761 mRNA_5393 0.69 +0.0
641,169 - 13761 mRNA_5393 0.71 -0.1
641,172 - 13761 mRNA_5393 0.72 +1.4
641,172 + 13761 mRNA_5393 0.72 -0.6
641,179 + 13761 mRNA_5393 0.72 -0.2
641,179 + 13761 mRNA_5393 0.72 +0.8
641,211 - 13761 mRNA_5393 0.76 +0.9
641,218 - 13761 mRNA_5393 0.77 +1.3
641,223 - 13761 mRNA_5393 0.77 +0.9
641,231 - 13761 mRNA_5393 0.78 -0.5
641,256 - 13761 mRNA_5393 0.81 -0.2
641,276 - 13761 mRNA_5393 0.83 +0.2
641,288 - 13761 mRNA_5393 0.84 -1.0
641,288 - 13761 mRNA_5393 0.84 +0.6
641,289 - 13761 mRNA_5393 0.84 +1.1
641,289 - 13761 mRNA_5393 0.84 -0.7
641,290 - 13761 mRNA_5393 0.84 +1.7
641,299 - 13761 mRNA_5393 0.85 +0.2
641,323 - 13761 mRNA_5393 0.88 +1.6
641,374 - +0.7
641,375 - +1.4
641,378 - -0.8
641,379 - +0.8
641,384 - -1.1
641,385 - +0.4
641,409 - +0.2
641,417 - +2.3
641,418 - +1.0
641,420 + +0.7
641,422 + +0.4
641,428 + +0.4
641,428 + -0.7
641,428 + -2.5
641,428 + +0.6
641,428 + +1.6
641,429 + -0.5
641,429 - +1.4
641,430 + -0.4
641,431 + -2.8
641,431 + -0.3
641,431 + -0.5
641,431 - +1.2
641,431 - -1.1
641,432 + +1.5
641,432 + -1.4
641,432 - -0.6
641,432 + +0.4
641,433 - +0.5
641,433 - -0.4
641,433 + -0.5
641,433 + -0.4
641,434 + +0.7
641,435 + -0.3
641,435 + -0.0
641,435 + +0.4
641,436 + -0.2
641,436 + -1.0
641,436 + +3.6
641,436 + -0.5
641,436 + -1.9
641,436 + +1.5
641,436 + +0.2
641,436 + -0.5
641,437 + -4.9
641,438 + -1.3
641,439 - +2.9
641,439 - +1.0
641,440 - +2.0
641,441 - -0.2
641,442 - +0.1
641,444 - +1.1
641,445 - +0.3
641,447 - -1.2
641,454 - -0.3

Or see this region's nucleotide sequence