Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5651

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14018 and 14019 are separated by 253 nucleotides mRNA_5650: 14018 - Hypothetical Protein, at 597,091 to 598,437 14018 mRNA_5651: 14019 - K13728 MAD2L2 mitotic spindle assembly checkpoint protein MAD2B, at 598,691 to 599,963 14019

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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597,714 + 14018 mRNA_5650 0.46 +0.9
597,853 + 14018 mRNA_5650 0.57 -0.5
598,172 + 14018 mRNA_5650 0.80 -1.6
598,499 - +1.0
598,524 + +0.3
598,779 - +0.0
598,918 - 14019 mRNA_5651 0.18 +0.6
598,948 - 14019 mRNA_5651 0.20 -0.3
599,245 + 14019 mRNA_5651 0.44 +0.6
599,255 + 14019 mRNA_5651 0.44 +0.9
600,114 - -0.4
600,116 + +0.6
600,125 + -0.6
600,335 + +0.6
600,427 - -1.3
600,429 - -0.2
600,445 + -0.7
600,460 + +0.5
600,462 + +1.0
600,604 - +2.5
600,609 + +0.1
600,615 - -1.1
600,895 - -0.4
600,899 + +3.0

Or see this region's nucleotide sequence