Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5968

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14335 and 14336 are separated by 296 nucleotides14336 and 14337 are separated by 192 nucleotides mRNA_5967: 14335 - Hypothetical Protein, at 1,348,034 to 1,349,199 14335 mRNA_5968: 14336 - Hypothetical Protein, at 1,349,496 to 1,350,670 14336 mRNA_5969: 14337 - Hypothetical Protein, at 1,350,863 to 1,351,981 14337

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,348,524 + 14335 mRNA_5967 0.42 -0.6
1,348,691 + 14335 mRNA_5967 0.56 -0.2
1,348,706 + 14335 mRNA_5967 0.58 +0.6
1,348,737 - 14335 mRNA_5967 0.60 +0.8
1,349,006 - 14335 mRNA_5967 0.83 -0.1
1,349,638 - 14336 mRNA_5968 0.12 -0.3
1,349,846 - 14336 mRNA_5968 0.30 +1.6
1,349,875 + 14336 mRNA_5968 0.32 +0.2
1,349,908 + 14336 mRNA_5968 0.35 +1.1
1,350,018 - 14336 mRNA_5968 0.44 +1.4
1,350,038 + 14336 mRNA_5968 0.46 -0.2
1,350,202 - 14336 mRNA_5968 0.60 +0.1
1,350,290 + 14336 mRNA_5968 0.68 +0.1
1,350,323 - 14336 mRNA_5968 0.70 +0.2
1,350,351 - 14336 mRNA_5968 0.73 -0.7
1,350,474 + 14336 mRNA_5968 0.83 -0.1
1,350,669 - +1.1
1,350,749 + +0.8
1,350,784 + -0.2
1,350,887 - +2.4
1,350,911 - +0.9
1,350,931 + -1.2
1,351,053 - 14337 mRNA_5969 0.17 -0.2
1,351,143 + 14337 mRNA_5969 0.25 +0.4
1,351,362 + 14337 mRNA_5969 0.45 +1.4
1,351,365 + 14337 mRNA_5969 0.45 +1.7
1,351,586 - 14337 mRNA_5969 0.65 +2.1
1,351,593 - 14337 mRNA_5969 0.65 +0.2
1,351,620 + 14337 mRNA_5969 0.68 +0.3
1,351,639 + 14337 mRNA_5969 0.69 +1.4

Or see this region's nucleotide sequence