Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6444

Experiment: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14811 and 14812 are separated by 630 nucleotides14812 and 14813 are separated by 805 nucleotides mRNA_6443: 14811 - K10427 DCTN5 dynactin 5, at 806,898 to 807,775 14811 mRNA_6444: 14812 - Hypothetical Protein, at 808,406 to 809,831 14812 mRNA_6445: 14813 - KOG2896 UV radiation resistance associated protein, at 810,637 to 814,255 14813

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
808,173 - +0.5
808,265 + +1.8
808,321 + +0.2
808,383 - +1.5
808,401 + -1.3
808,412 + +0.7
808,422 - -1.6
808,439 + -0.3
808,534 - +1.9
808,560 - 14812 mRNA_6444 0.11 +0.2
808,561 + 14812 mRNA_6444 0.11 +0.1
808,699 + 14812 mRNA_6444 0.21 +1.0
808,706 + 14812 mRNA_6444 0.21 +3.1
808,706 + 14812 mRNA_6444 0.21 +0.8
808,886 + 14812 mRNA_6444 0.34 +2.7
808,985 - 14812 mRNA_6444 0.41 +0.3
809,024 + 14812 mRNA_6444 0.43 +0.2
809,080 + 14812 mRNA_6444 0.47 -0.2
809,090 + 14812 mRNA_6444 0.48 +1.0
809,101 - 14812 mRNA_6444 0.49 +0.8
809,103 + 14812 mRNA_6444 0.49 +0.4
809,149 - 14812 mRNA_6444 0.52 +1.2
809,150 + 14812 mRNA_6444 0.52 -0.2
809,167 - 14812 mRNA_6444 0.53 +0.3
809,167 + 14812 mRNA_6444 0.53 +0.6
809,173 + 14812 mRNA_6444 0.54 +0.4
809,207 - 14812 mRNA_6444 0.56 +0.3
809,347 - 14812 mRNA_6444 0.66 +0.2
809,418 - 14812 mRNA_6444 0.71 +3.7
809,423 - 14812 mRNA_6444 0.71 +0.2
809,426 - 14812 mRNA_6444 0.72 -2.4
809,426 - 14812 mRNA_6444 0.72 -0.0
809,444 + 14812 mRNA_6444 0.73 -0.2
809,462 - 14812 mRNA_6444 0.74 +0.3
809,463 - 14812 mRNA_6444 0.74 +2.1
809,468 + 14812 mRNA_6444 0.74 +0.6
809,485 + 14812 mRNA_6444 0.76 -0.4
809,508 + 14812 mRNA_6444 0.77 -0.2
809,508 + 14812 mRNA_6444 0.77 +0.0
809,534 - 14812 mRNA_6444 0.79 +0.7
809,601 + 14812 mRNA_6444 0.84 +0.7
809,998 - +1.7
810,031 - +0.6
810,202 + +1.2
810,226 - -0.5
810,488 - +0.5
810,541 - -0.1

Or see this region's nucleotide sequence