Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6846

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_6846: 15214 - K02603 ORC1 origin recognition complex subunit 1, at 260,829 to 263,990 15214

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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259,907 + +2.1
260,031 + -0.3
260,159 + +0.8
260,283 - +0.6
260,326 + -0.5
260,421 - +2.5
260,433 + -0.9
260,439 - +1.3
260,444 + -1.8
260,450 + +0.5
260,508 - -0.2
260,575 - +0.5
260,751 + -0.4
260,752 + +0.2
260,754 - -0.5
260,963 - -0.4
261,062 - +0.1
261,209 - 15214 mRNA_6846 0.12 +0.4
261,414 - 15214 mRNA_6846 0.19 -3.7
262,352 + 15214 mRNA_6846 0.48 -0.1
264,067 - +0.9
264,248 - +0.4
264,400 + -1.1
264,551 + +0.3
264,583 + +0.6
264,707 + +0.5
264,709 - +1.3
264,857 + +0.1
264,858 - +0.3
264,868 - +2.3
264,870 - +1.8
264,872 - +1.7
264,875 + +0.9
264,877 + -0.9
264,886 + +2.9
264,893 - +1.9
264,897 - -0.7
264,906 - +2.1
264,907 - -0.1
264,925 - +0.9
264,981 + +0.1

Or see this region's nucleotide sequence