Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7443

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15810 and 15811 are separated by 740 nucleotides15811 and 15812 are separated by 166 nucleotides mRNA_7442: 15810 - K02886 RP-L2, MRPL2, rplB large subunit ribosomal protein L2, at 288,687 to 290,089 15810 mRNA_7443: 15811 - Hypothetical Protein, at 290,830 to 292,138 15811 mRNA_7444: 15812 - Hypothetical Protein, at 292,305 to 293,773 15812

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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290,483 - +0.3
290,490 + +0.5
290,493 - +1.0
290,495 + +0.6
290,497 + +0.6
290,506 + +2.0
290,508 - +0.3
290,509 - +0.4
290,517 - +0.6
290,527 + +0.2
290,528 - -0.6
290,653 + +0.9
290,785 - -1.1
290,936 + +0.0
290,943 + -0.8
291,215 - 15811 mRNA_7443 0.29 +0.5
291,224 - 15811 mRNA_7443 0.30 +0.2
291,241 + 15811 mRNA_7443 0.31 +0.7
291,251 - 15811 mRNA_7443 0.32 +0.4
291,258 + 15811 mRNA_7443 0.33 +0.5
291,377 + 15811 mRNA_7443 0.42 +0.1
291,658 + 15811 mRNA_7443 0.63 +0.5
291,808 - 15811 mRNA_7443 0.75 -0.2
292,221 - +0.8
292,827 + 15812 mRNA_7444 0.36 -0.3
292,981 + 15812 mRNA_7444 0.46 +0.5
293,119 + 15812 mRNA_7444 0.55 +0.0

Or see this region's nucleotide sequence