Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7617

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15984 and 15985 are separated by 597 nucleotides mRNA_7616: 15984 - K00706 E2.4.1.34 1,3-beta-glucan synthase, at 684,881 to 690,807 15984 mRNA_7617: 15985 - Hypothetical Protein, at 691,405 to 692,628 15985

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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690,893 + -1.6
691,065 + +0.2
691,073 - -0.6
691,101 + +0.3
691,114 + +0.7
691,164 - -0.2
691,185 + -0.1
691,220 + +1.5
691,239 - -0.1
691,264 + -1.5
691,265 - -0.1
691,354 - +0.7
691,369 - -0.2
691,469 + +0.2
691,629 + 15985 mRNA_7617 0.18 +0.4
691,715 + 15985 mRNA_7617 0.25 -1.4
691,735 + 15985 mRNA_7617 0.27 +0.2
691,799 - 15985 mRNA_7617 0.32 -0.6
691,808 - 15985 mRNA_7617 0.33 +0.7
691,831 + 15985 mRNA_7617 0.35 +1.1
692,003 + 15985 mRNA_7617 0.49 -1.9
692,039 - 15985 mRNA_7617 0.52 +0.5
692,183 - 15985 mRNA_7617 0.64 +0.5
692,245 + 15985 mRNA_7617 0.69 +0.3
692,461 + 15985 mRNA_7617 0.86 +0.7
692,508 - -0.4
692,619 + -0.8
692,629 + -0.1
692,637 + -0.5
692,752 + +2.2
692,764 - +0.5
692,775 + -0.7
692,781 - +1.0
692,783 - +1.3
692,791 - +0.3
692,796 - -1.5
692,806 + -1.5
692,806 + -0.7
692,815 + +0.6
692,818 - -0.6
692,820 - -0.5
692,822 + -2.7
692,822 - +1.1
692,824 + +1.3
692,824 - -1.6
692,830 + -0.0
692,831 + -1.6
692,831 + +0.4
692,836 + -1.3
692,837 + +0.0
692,839 + +1.2
692,841 - +0.8
692,844 - +0.8
692,846 - -1.0
692,847 + -0.8
692,851 + +1.6
692,851 + +0.4
692,851 + +2.0
692,853 - +0.2
692,853 - -2.0
692,853 + +0.6
692,869 + +1.2
692,869 + +0.2
692,877 + -0.2
692,880 - +1.0
692,888 + -0.2
692,889 - +1.2
692,890 + +0.5
692,892 - +1.7
692,893 + -0.4
692,898 - +0.8
692,901 - -0.3
692,902 - -0.5
692,902 - +0.1
692,903 - -1.8
692,914 - -0.4
692,962 - +0.7
692,982 + +0.8
693,001 - +2.2
693,011 + +1.1
693,028 - -1.4
693,037 - -0.3
693,041 + +0.8
693,043 + +0.3
693,049 - +0.5
693,060 - +0.7
693,063 + +0.4
693,073 + +1.2
693,077 + +0.2
693,102 + +0.0
693,181 + +0.0
693,186 + +1.6
693,190 - +0.2
693,192 - +1.0
693,192 - +0.5
693,193 + +1.3
693,197 + -1.1
693,197 - +0.4
693,198 + -0.6
693,200 + +0.5
693,201 - +0.2
693,203 + -0.7
693,213 + +0.7
693,214 + +0.8
693,219 - +1.5
693,223 + +0.6
693,232 + +0.1
693,233 - +0.1
693,242 - +1.6
693,244 - +1.2
693,244 - +0.3
693,255 - -1.5
693,271 + +1.4
693,277 + -1.7
693,286 - +0.7
693,287 + +0.6
693,291 - +0.8
693,297 - -0.6
693,305 - +0.9
693,312 + +1.9
693,315 + +1.0
693,326 - +0.2
693,330 - +0.4
693,344 - -0.5
693,349 + +0.5
693,370 + -0.3
693,375 - +0.1
693,379 - +0.2
693,383 - +0.7
693,389 + +0.4
693,390 - -0.0
693,400 - +0.5
693,401 - +0.3
693,401 + +0.1
693,408 - +0.5
693,413 + +2.0
693,416 + -0.0
693,419 - +0.0
693,424 + -1.3
693,436 + +0.1
693,437 + -0.9
693,445 + +0.4
693,453 + +0.2
693,457 + +1.2
693,461 - -1.7
693,465 - +0.5
693,465 - -0.6
693,466 - +0.4
693,466 - -0.9
693,467 + +0.8
693,468 - +0.1
693,473 + -0.2
693,478 - +0.7
693,479 + +1.4
693,492 + -0.0
693,499 - +0.3
693,499 - -0.2
693,500 + +0.9
693,532 + +0.8
693,541 + +0.3
693,613 + -0.3

Or see this region's nucleotide sequence