Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7745

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16113 and 16114 are separated by 158 nucleotides mRNA_7745: 16113 - Hypothetical Protein, at 974,845 to 975,369 16113 mRNA_7746: 16114 - Hypothetical Protein, at 975,528 to 976,658 16114

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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973,939 + +1.2
974,109 - -0.1
974,111 + +0.6
974,114 - -0.4
974,119 - -1.5
974,122 + +0.4
974,125 - +0.3
974,127 + +0.1
974,127 + +0.1
974,128 + +0.7
974,128 + -1.7
974,153 + +0.3
974,249 - +0.6
974,249 - +0.2
974,252 - -0.0
974,268 - -0.4
974,269 + +0.1
974,543 + +1.0
974,835 + +0.5
975,274 - 16113 mRNA_7745 0.82 -0.6
975,394 + -1.4
975,396 - -0.1
975,404 - +1.4
975,463 - -0.4
975,480 - +1.6

Or see this region's nucleotide sequence