Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7924

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16292 and 16293 are separated by 906 nucleotides mRNA_7924: 16292 - Hypothetical Protein, at 34,396 to 34,788 16292 mRNA_7925: 16293 - Hypothetical Protein, at 35,695 to 36,297 16293

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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33,468 + +0.8
33,656 + +1.5
33,737 - +0.2
33,741 + +0.4
33,894 + -0.2
34,070 - +1.3
34,168 + +0.4
34,169 - -0.1
34,354 + +0.3
34,384 + +0.4
34,428 - -0.2
34,447 - 16292 mRNA_7924 0.13 -0.8
34,508 - 16292 mRNA_7924 0.28 -1.0
34,610 + 16292 mRNA_7924 0.54 +1.3
34,630 - 16292 mRNA_7924 0.60 +0.5
34,785 + +0.9
34,795 + -0.7
34,870 + +1.0
34,907 + +0.4
34,918 - -0.4
34,926 - +0.3
35,013 - +0.8
35,089 + +0.3
35,361 + -0.3
35,596 - +1.0

Or see this region's nucleotide sequence