Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7995

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16363 and 16364 are separated by 180 nucleotides mRNA_7995: 16363 - Hypothetical Protein, at 173,572 to 173,952 16363 mRNA_7996: 16364 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 174,133 to 175,085 16364

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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173,259 + +0.9
173,318 + -0.1
173,356 + -1.2
173,361 - +0.2
173,374 - +0.5
173,399 + +0.0
173,438 - +0.1
173,477 - +0.7
173,479 - +0.2
173,483 + -1.0
173,490 + +1.7
173,510 + -0.0
173,532 - +1.6
173,576 + -0.4
173,576 + +0.4
173,596 + +1.1
173,619 - 16363 mRNA_7995 0.12 +0.1
173,631 - 16363 mRNA_7995 0.15 -1.5
173,788 - 16363 mRNA_7995 0.57 +1.8
173,840 - 16363 mRNA_7995 0.70 +0.8
174,058 + -1.0
174,093 - -0.4
174,158 - -1.3
174,270 - 16364 mRNA_7996 0.14 +0.2
174,359 + 16364 mRNA_7996 0.24 +1.1
174,502 + 16364 mRNA_7996 0.39 -0.8
174,528 + 16364 mRNA_7996 0.41 +1.7
174,584 + 16364 mRNA_7996 0.47 +0.2
174,675 - 16364 mRNA_7996 0.57 +0.5

Or see this region's nucleotide sequence