Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_801

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9168 and 9169 are separated by 214 nucleotides9169 and 9170 are separated by 513 nucleotides mRNA_800: 9168 - K10418 DYNLL dynein light chain LC8-type, at 1,904,399 to 1,905,250 9168 mRNA_801: 9169 - SUPERFAMILY--SSF52047, at 1,905,465 to 1,906,798 9169 mRNA_802: 9170 - SUPERFAMILY--SSF52047, at 1,907,312 to 1,908,570 9170

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,905,063 + 9168 mRNA_800 0.78 -0.7
1,905,440 - +1.5
1,905,446 + +0.0
1,905,447 - -0.0
1,905,454 + -0.2
1,905,566 - +0.5
1,906,005 - 9169 mRNA_801 0.40 +0.2
1,906,039 + 9169 mRNA_801 0.43 -0.2
1,906,140 + 9169 mRNA_801 0.51 +1.2
1,906,327 - 9169 mRNA_801 0.65 +0.7
1,906,610 - 9169 mRNA_801 0.86 -0.1
1,906,761 + -0.0
1,906,810 + +0.3
1,906,894 - +1.8
1,906,895 + +2.5
1,906,911 - -0.2
1,907,185 + +0.5
1,907,186 - +1.3
1,907,217 + -0.1
1,907,224 + +0.9
1,907,320 - +1.2
1,907,326 - +0.4
1,907,329 - -0.1
1,907,399 - +1.4

Or see this region's nucleotide sequence