Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_896

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9263 and 9264 are separated by 251 nucleotides mRNA_895: 9263 - Hypothetical Protein, at 2,138,324 to 2,139,177 9263 mRNA_896: 9264 - Hypothetical Protein, at 2,139,429 to 2,140,849 9264

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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2,138,577 + 9263 mRNA_895 0.30 +0.1
2,139,175 + +0.3
2,139,291 + +0.9
2,139,568 + +0.8
2,139,875 + 9264 mRNA_896 0.31 -1.4
2,139,893 + 9264 mRNA_896 0.33 +0.2
2,140,178 - 9264 mRNA_896 0.53 +0.4
2,140,219 - 9264 mRNA_896 0.56 +0.1
2,140,225 + 9264 mRNA_896 0.56 -0.4
2,140,703 - 9264 mRNA_896 0.90 +2.1
2,140,847 + +0.5

Or see this region's nucleotide sequence