Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_945

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9313 and 9314 are separated by 463 nucleotides mRNA_945: 9313 - Hypothetical Protein, at 37,394 to 37,567 9313 mRNA_946: 9314 - Hypothetical Protein, at 38,031 to 38,831 9314

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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36,687 + +1.0
36,798 + -0.5
37,240 - +1.2
37,243 + -1.0
37,633 - +0.7
37,785 - -0.1
37,808 + +0.8
37,916 - +0.3
37,922 - +0.3
37,935 - +0.3
37,943 + +0.0
37,943 + +1.1
37,952 + -0.2
37,953 + +1.9
37,956 + +0.6
37,956 - +0.5
37,958 - -0.1
37,960 - +0.2
37,960 - -0.3
37,984 + -1.2
37,990 + -0.0
37,993 + -0.1
37,999 + -0.2
38,002 + +0.3
38,004 + -0.9
38,004 + +1.6
38,004 + +0.1
38,006 - -1.1
38,008 + +1.0
38,026 - +0.6
38,026 - -0.2
38,052 + +0.5
38,064 + +0.6
38,101 + -0.2
38,104 + -0.7
38,150 + 9314 mRNA_946 0.15 +0.4
38,193 + 9314 mRNA_946 0.20 -0.7
38,264 + 9314 mRNA_946 0.29 +1.8
38,288 - 9314 mRNA_946 0.32 +0.5
38,309 + 9314 mRNA_946 0.35 +1.0
38,382 + 9314 mRNA_946 0.44 +1.5

Or see this region's nucleotide sequence