Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_976

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9344 and 9345 are separated by 362 nucleotides mRNA_976: 9344 - SUPERFAMILY--SSF54928, at 118,269 to 121,735 9344 mRNA_977: 9345 - KOG1378 Purple acid phosphatase, at 122,098 to 123,952 9345

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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117,723 - +0.5
117,761 - -0.3
118,027 - -0.5
118,502 - +0.3
118,508 - -0.6
118,512 - -0.6
118,531 + +0.5
118,638 + 9344 mRNA_976 0.11 +1.0
118,806 + 9344 mRNA_976 0.15 +0.8
118,948 + 9344 mRNA_976 0.20 +0.4
119,066 + 9344 mRNA_976 0.23 +1.5
119,097 + 9344 mRNA_976 0.24 -0.3
119,215 - 9344 mRNA_976 0.27 +0.9
119,297 - 9344 mRNA_976 0.30 -2.9
119,414 + 9344 mRNA_976 0.33 +0.3
119,613 + 9344 mRNA_976 0.39 -1.5
119,869 + 9344 mRNA_976 0.46 +0.6
120,003 + 9344 mRNA_976 0.50 +0.2
120,127 + 9344 mRNA_976 0.54 +0.2
120,172 + 9344 mRNA_976 0.55 +2.3
120,562 - 9344 mRNA_976 0.66 +1.1
120,747 + 9344 mRNA_976 0.71 +2.0
120,854 + 9344 mRNA_976 0.75 -2.2
120,896 - 9344 mRNA_976 0.76 -0.7
121,167 - 9344 mRNA_976 0.84 +0.4
121,184 - 9344 mRNA_976 0.84 -0.3
121,334 - 9344 mRNA_976 0.88 +0.5
121,601 + +0.0
121,628 - +0.2
121,649 - +0.2
121,735 + -0.1
121,950 + -1.1
122,112 - -0.2
122,475 + 9345 mRNA_977 0.20 +0.3
122,600 - 9345 mRNA_977 0.27 +1.3

Or see this region's nucleotide sequence