Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1251

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9618 and 9619 are separated by 264 nucleotides9619 and 9620 are separated by 239 nucleotides mRNA_1250: 9618 - Hypothetical Protein, at 754,124 to 756,266 9618 mRNA_1251: 9619 - HMMPfam-Protein of unknown function (DUF2611)-PF11022, at 756,531 to 757,355 9619 mRNA_1252: 9620 - BLAST glycosyltransferase family 22 protein [Mixia osmu..., at 757,595 to 759,040 9620

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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755,913 - 9618 mRNA_1250 0.83 +2.0
756,465 - -0.2
756,469 + +0.1
756,472 + -0.8
756,482 - +1.8
756,486 - +1.3
756,487 + +0.1
756,488 - -0.2
756,647 + 9619 mRNA_1251 0.14 +1.1
756,671 + 9619 mRNA_1251 0.17 -0.5
756,786 + 9619 mRNA_1251 0.31 -1.1
756,797 + 9619 mRNA_1251 0.32 +0.1
757,182 + 9619 mRNA_1251 0.79 +1.6
757,183 - 9619 mRNA_1251 0.79 -0.0
757,490 + +0.1
757,563 + +0.7
757,647 - -1.1
757,692 - -0.1
757,944 + 9620 mRNA_1252 0.24 +0.7
758,220 - 9620 mRNA_1252 0.43 +2.3
758,237 - 9620 mRNA_1252 0.44 -0.0

Or see this region's nucleotide sequence