Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2130

Experiment: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10497 and 10498 are separated by 167 nucleotides mRNA_2129: 10497 - K17741 GRE2 NADPH-dependent methylglyoxal reductase, at 136,937 to 138,468 10497 mRNA_2130: 10498 - Hypothetical Protein, at 138,636 to 139,652 10498

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
137,667 + 10497 mRNA_2129 0.48 -1.7
137,671 + 10497 mRNA_2129 0.48 -0.3
137,809 + 10497 mRNA_2129 0.57 -2.0
138,020 - 10497 mRNA_2129 0.71 -0.5
138,100 - 10497 mRNA_2129 0.76 -0.2
138,106 + 10497 mRNA_2129 0.76 -1.9
138,266 + 10497 mRNA_2129 0.87 -0.5
138,533 + -0.0
138,654 + +0.4
138,657 + -0.1
138,706 - +1.4
138,981 - 10498 mRNA_2130 0.34 -0.6
138,996 + 10498 mRNA_2130 0.35 -1.0
139,209 + 10498 mRNA_2130 0.56 +1.3
139,405 - 10498 mRNA_2130 0.76 +0.4
139,567 + +0.9
139,598 - +1.4
139,606 + +1.0
139,628 + -0.7
139,678 - -0.4
139,835 - +1.1
139,899 + -0.0
140,013 - +1.8
140,285 - +0.8
140,337 + +0.6
140,419 - -0.8
140,537 + -0.1

Or see this region's nucleotide sequence