Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3303

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11671 and 11672 are separated by 201 nucleotides mRNA_3303: 11671 - K03249 EIF3F translation initiation factor 3 subunit F, at 349,285 to 350,385 11671 mRNA_3304: 11672 - KOG2753 Uncharacterized conserved protein, contains PCI domain, at 350,587 to 352,119 11672

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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348,558 - +0.6
348,868 + +1.2
348,963 + -1.7

Or see this region's nucleotide sequence