Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3619

Experiment: 40 hrs No Buoyancy Separation

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	Sysname	Fraction	40 hrs No Buoyancy Separation
178,269	+				-0.6
178,440	+	11986	mRNA_3618	0.27	+0.1
178,539	+	11986	mRNA_3618	0.41	+0.9
178,679	+	11986	mRNA_3618	0.61	+1.0
178,731	+	11986	mRNA_3618	0.69	+0.0
178,850	-	11986	mRNA_3618	0.86	+1.4
178,851	-	11986	mRNA_3618	0.86	+2.3
178,856	+	11986	mRNA_3618	0.87	+0.5
179,128	-				+0.3
179,134	+				+1.0
179,163	-				+1.1
179,193	-				+0.4
179,197	+				+0.1
179,201	+				-1.6
179,324	-				+0.1
179,662	-	11987	mRNA_3619	0.19	-0.7
180,225	+	11987	mRNA_3619	0.45	-0.1
180,225	+	11987	mRNA_3619	0.45	+0.4
180,643	-	11987	mRNA_3619	0.63	-0.4
180,795	-	11987	mRNA_3619	0.70	-1.2
180,881	-	11987	mRNA_3619	0.74	-1.4
180,929	+	11987	mRNA_3619	0.76	+0.4
180,989	+	11987	mRNA_3619	0.79	-1.5
181,365	-				+0.4
181,579	+				+0.5
181,613	-				+0.3
181,615	-				+0.8
181,621	-				+1.2
181,627	+				-0.8
181,656	-				-0.4
181,685	-				-1.0
181,687	-				-1.1
181,695	+				+2.3
181,698	-				+1.0
181,701	-				+0.5
181,711	+				+0.5
181,853	-				+0.5
182,001	+	11988	mRNA_3620	0.19	+1.2
182,026	+	11988	mRNA_3620	0.21	-0.1
182,114	+	11988	mRNA_3620	0.28	-0.6
182,441	-	11988	mRNA_3620	0.54	+1.3