Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5095

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13462 and 13463 are separated by 136 nucleotides mRNA_5094: 13462 - K10259 MET30 F-box and WD-40 domain protein MET30, at 1,733,465 to 1,736,154 13462 mRNA_5095: 13463 - K03106 SRP54, ffh signal recognition particle subunit SRP54, at 1,736,291 to 1,738,860 13463

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,737,485 - 13463 mRNA_5095 0.46 -1.1
1,738,905 + -3.5
1,738,914 - -1.5

Or see this region's nucleotide sequence