Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5096

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13464 and 13465 are separated by 297 nucleotides mRNA_5096: 13464 - K11292 SUPT6H, SPT6 transcription elongation factor SPT6, at 1,740,048 to 1,744,775 13464 mRNA_5097: 13465 - Hypothetical Protein, at 1,745,073 to 1,746,754 13465

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,744,771 + -0.1
1,744,969 + +0.3
1,745,378 - 13465 mRNA_5097 0.18 +0.3
1,745,677 - 13465 mRNA_5097 0.36 +0.0
1,745,678 + 13465 mRNA_5097 0.36 -0.7

Or see this region's nucleotide sequence