Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5266

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13634 and 13635 are separated by 681 nucleotides mRNA_5266: 13634 - K03262 EIF5 translation initiation factor 5, at 315,096 to 316,635 13634 mRNA_5267: 13635 - KOG2504 Monocarboxylate transporter, at 317,317 to 318,833 13635

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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314,229 + -0.2
314,784 - -0.7
314,823 - -0.1
316,692 + -0.2
316,715 + +0.7
316,861 - -1.1
317,009 - +1.0
317,010 - -0.4
317,012 + -0.3
317,433 + +1.3
317,631 - 13635 mRNA_5267 0.21 -0.0

Or see this region's nucleotide sequence