Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5553

Experiment: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13920 and 13921 are separated by 201 nucleotides13921 and 13922 are separated by 602 nucleotides mRNA_5552: 13920 - K03360 GRR1 F-box and leucine-rich repeat protein GRR1, at 359,863 to 362,993 13920 mRNA_5553: 13921 - K20791 NAA10_11, ARD1_2 N-alpha-acetyltransferase 10/11, at 363,195 to 364,083 13921 mRNA_5554: 13922 - KOG0979 Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily, at 364,686 to 369,253 13922

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
362,355 + 13920 mRNA_5552 0.80 +0.5
362,381 + 13920 mRNA_5552 0.80 -0.8
362,774 + +0.0
362,831 - -0.8
363,094 - -0.3
364,236 + +0.7
364,272 - +1.5
364,394 + +0.1
364,517 - -0.1
364,545 - -0.5
364,546 - -0.2
364,626 + +0.0

Or see this region's nucleotide sequence