Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6753

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15121 and 15122 are separated by 188 nucleotides mRNA_6753: 15121 - K00999 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase, at 60,927 to 62,479 15121 mRNA_6754: 15122 - K15542 PFS2 polyadenylation factor subunit 2, at 62,668 to 65,062 15122

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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59,941 + +1.1
59,947 + -0.1
59,980 + -0.4
60,153 - -0.7
60,231 - +1.1
60,270 + -0.1
60,544 - -0.6
60,545 + +0.5
60,572 + -0.2
60,682 + -0.3
60,805 - +1.0
60,856 - -1.3
60,867 + -0.7
62,574 - -1.0
62,601 + +0.8

Or see this region's nucleotide sequence