Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7045

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15413 and 15414 are separated by 151 nucleotides mRNA_7045: 15413 - K20288 COG1 conserved oligomeric Golgi complex subunit 1, at 745,065 to 748,525 15413 mRNA_7046: 15414 - K01341 KEX2 kexin, at 748,677 to 751,864 15414

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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744,238 - +0.0
744,244 - +0.4
744,388 - -0.8
744,407 - +0.3
744,411 + -1.7
744,536 - +0.0
744,830 - -0.8
744,838 + -1.0
744,969 - -1.4
744,980 - +0.4
745,006 - -0.4
748,358 - +0.7
748,683 - -1.3

Or see this region's nucleotide sequence