Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7094

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15462 and 15463 are separated by 26 nucleotides mRNA_7094: 15462 - KOG1667 Zn2+-binding protein Melusin/RAR1, contains CHORD domain, at 870,495 to 871,178 15462 mRNA_7095: 15463 - Hypothetical Protein, at 871,205 to 873,737 15463

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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870,251 + +0.1
870,260 - +3.3
870,270 + +0.2
870,270 + +0.0
870,271 + -0.0
870,273 - +1.5
870,281 + +0.5
870,399 + -0.7
870,411 - -0.5
870,425 + -2.3
870,542 + +2.6
870,707 + 15462 mRNA_7094 0.31 +0.9
870,866 + 15462 mRNA_7094 0.54 -1.3
871,403 - -0.3
871,857 - 15463 mRNA_7095 0.26 -1.1

Or see this region's nucleotide sequence