Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7133

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15500 and 15501 are separated by 242 nucleotides mRNA_7132: 15500 - K16938 SEPT3_9_12 septin 3/9/12, at 952,780 to 954,588 15500 mRNA_7133: 15501 - Hypothetical Protein, at 954,831 to 956,443 15501

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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954,252 - 15500 mRNA_7132 0.81 -0.4
954,882 - +0.4
955,075 - 15501 mRNA_7133 0.15 -0.5
955,201 + 15501 mRNA_7133 0.23 +1.0
955,363 - 15501 mRNA_7133 0.33 +0.1
955,478 - 15501 mRNA_7133 0.40 +0.1
955,595 + 15501 mRNA_7133 0.47 +0.9
955,643 + 15501 mRNA_7133 0.50 -0.0
955,646 - 15501 mRNA_7133 0.51 +1.6
956,239 - 15501 mRNA_7133 0.87 -1.1
956,499 + -0.5
956,532 + -0.3
956,664 + +0.1
956,675 + -3.1
956,676 - -0.5
956,683 - -0.5
956,720 + -1.4
956,978 + +0.5
957,002 - -0.4
957,010 + -0.1
957,417 - -1.4

Or see this region's nucleotide sequence