Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7472

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15840 and 15841 are separated by 833 nucleotides mRNA_7472: 15840 - K03680 EIF2B4 translation initiation factor eIF-2B subunit delta, at 365,102 to 366,661 15840 mRNA_7473: 15841 - Hypothetical Protein, at 367,495 to 368,778 15841

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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364,564 + -1.4
364,641 - +0.5
364,641 - -1.4
364,695 - +0.7
364,725 - -1.0
364,829 - +0.4
366,988 + +0.0
367,076 + -0.7
367,159 - +0.6
367,162 - +0.2
367,166 - +2.4
367,174 - -0.8
367,301 + +2.3
367,330 - -1.9
367,360 + -0.5
367,477 + +0.3
367,614 - +0.1
367,627 - 15841 mRNA_7473 0.10 +1.0
367,636 - 15841 mRNA_7473 0.11 -0.2

Or see this region's nucleotide sequence