Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7502

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15870 and 15871 are separated by 938 nucleotides mRNA_7502: 15870 - K19788 OLA1 obg-like ATPase 1, at 444,835 to 446,831 15870 mRNA_7503: 15871 - Hypothetical Protein, at 447,770 to 449,407 15871

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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443,934 - -1.1
444,542 + +2.4
445,833 + 15870 mRNA_7502 0.50 -0.7
446,577 - 15870 mRNA_7502 0.87 +2.3
446,846 - -0.5
446,879 + -1.0
447,023 + -2.4
447,049 + +0.3
447,161 + -0.3
447,173 + +0.1
447,308 + -1.5
447,443 - +0.6
447,458 + +1.0
447,463 - -2.0
447,590 - +0.9
447,606 - -0.7
447,607 + -0.3
447,610 - -1.1
447,615 - +0.0
447,620 + +1.0
447,635 + -1.1
447,738 + -0.5
447,740 - -1.3
447,770 + +0.2

Or see this region's nucleotide sequence