Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7706

Experiment: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_7706: 16074 - Hypothetical Protein, at 892,554 to 894,176 16074

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
891,564 + -0.6
891,570 + -0.3
891,610 - -0.4
891,636 + +1.4
891,703 + +0.1
891,715 - +0.3
891,721 + +0.2
891,723 + +0.9
891,739 - +1.0
891,740 + -0.6
891,745 - +0.4
891,759 + +0.0
891,761 - +0.6
891,780 - +0.3
891,791 - +1.3
891,849 - -1.0
891,853 - -1.3
891,864 + +2.2
891,873 - -0.4
891,877 + +1.1
891,882 - -0.4
891,931 - +1.2
891,931 - -0.4
891,933 - +0.7
891,934 + +0.0
891,937 - -0.9
891,941 - +0.6
891,956 - +0.1
891,964 + -1.2
891,968 + +0.5
891,973 - -0.9
891,975 + +0.2
891,982 - +0.3
891,997 + +0.5
892,014 - -0.2
892,104 - +0.6
892,105 - +0.1
892,114 + -0.5
892,133 - -2.5
892,242 + +0.4
892,261 + -0.9
892,268 - +0.1
892,296 + +2.1
892,401 + +0.2
892,437 + +0.2
892,463 + +0.5
892,463 + -0.8
892,503 - -0.3
892,515 + +0.2
892,534 - -1.2
892,541 + -1.6
892,554 - -0.9
892,556 + -0.1
892,709 - +1.9
892,721 + 16074 mRNA_7706 0.10 -1.3
892,843 + 16074 mRNA_7706 0.18 +0.1
893,088 - 16074 mRNA_7706 0.33 -2.6
893,089 + 16074 mRNA_7706 0.33 -0.5
893,419 - 16074 mRNA_7706 0.53 +1.3
893,738 + 16074 mRNA_7706 0.73 +1.3
893,749 + 16074 mRNA_7706 0.74 +0.4
894,429 + -0.9
894,429 - -0.2
894,436 - +0.2
894,464 + -0.2
894,590 + +0.9
894,605 - -0.1
894,607 - +0.7
894,608 + -0.4
894,737 + -1.7
894,743 - -0.7
894,931 + +0.2
894,940 + +2.4
895,059 + +0.4

Or see this region's nucleotide sequence