Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7731

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16099 and 16100 are separated by 812 nucleotides mRNA_7731: 16099 - Hypothetical Protein, at 947,263 to 948,324 16099 mRNA_7732: 16100 - Hypothetical Protein, at 949,137 to 950,100 16100

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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946,389 + +0.2
946,432 + -0.2
946,482 - -0.3
946,546 + -1.4
946,573 + -0.5
946,670 - -0.7
946,712 + -1.9
946,860 - -0.4
946,996 - +1.6
946,999 - -0.3
947,005 - +1.3
947,026 - -0.1
947,095 + +0.2
947,306 + -0.8
947,316 + +0.7
948,054 - 16099 mRNA_7731 0.74 +1.5
948,320 - +1.8
948,329 + -0.6
948,419 + -0.1
948,436 - -0.7
948,495 - -0.4
948,788 + +0.7

Or see this region's nucleotide sequence