Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7747

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16114 and 16115 are separated by 94 nucleotides16115 and 16116 are separated by 178 nucleotides mRNA_7746: 16114 - Hypothetical Protein, at 975,528 to 976,658 16114 mRNA_7747: 16115 - Hypothetical Protein, at 976,753 to 979,650 16115 mRNA_7748: 16116 - Hypothetical Protein, at 979,829 to 980,468 16116

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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979,434 - -0.6
979,595 - -0.6
979,660 + -0.9
979,949 - 16116 mRNA_7748 0.19 -0.1
979,953 - 16116 mRNA_7748 0.19 -2.0
980,207 - 16116 mRNA_7748 0.59 +0.1
980,308 + 16116 mRNA_7748 0.75 -0.7
980,310 + 16116 mRNA_7748 0.75 -0.7
980,347 - 16116 mRNA_7748 0.81 +1.0
980,376 + 16116 mRNA_7748 0.85 -0.2

Or see this region's nucleotide sequence