Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_118

Experiment: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8485 and 8486 are separated by 336 nucleotides mRNA_117: 8485 - K14815 MRT4 mRNA turnover protein 4, at 276,984 to 278,095 8485 mRNA_118: 8486 - HMMPfam-Protein of unknown function (DUF1674)-PF07896, at 278,432 to 278,981 8486

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
278,191 + +0.5
278,224 - -0.8
278,359 + -1.0
278,653 + 8486 mRNA_118 0.40 +2.0
278,825 + 8486 mRNA_118 0.71 -0.2
279,060 + -0.6
279,113 + +0.1
279,141 - +2.1
279,399 - -1.1
279,687 - -0.3

Or see this region's nucleotide sequence