Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_387

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8754 and 8755 are separated by 371 nucleotides mRNA_386: 8754 - Hypothetical Protein, at 898,444 to 900,294 8754 mRNA_387: 8755 - Hypothetical Protein, at 900,666 to 901,434 8755

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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899,733 + 8754 mRNA_386 0.70 +1.1
899,878 - 8754 mRNA_386 0.77 -0.1
900,286 + -0.6
901,297 + 8755 mRNA_387 0.82 -3.4
901,309 - 8755 mRNA_387 0.84 +0.8
901,309 - 8755 mRNA_387 0.84 -1.5
901,433 - -0.2
901,456 + +0.4
901,461 + -0.6
901,472 - -0.1
901,720 - -0.4
901,779 + +1.2
902,018 + -0.8
902,039 - +1.4
902,047 - -0.5
902,049 - +0.5
902,132 - -0.5
902,180 - +0.1
902,184 - -2.5

Or see this region's nucleotide sequence