Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_482

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_482: 8850 - Hypothetical Protein, at 1,146,719 to 1,146,997 8850

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,145,758 - -0.2
1,145,765 + +0.1
1,145,774 - +0.9
1,145,777 + -0.3
1,145,799 + -0.0
1,145,929 - -0.0
1,145,930 + -1.1
1,145,931 - +1.6
1,145,939 - -2.6
1,145,953 + -0.8
1,146,012 + +0.7
1,146,021 - -0.8
1,146,095 - +1.1
1,146,174 - +1.3
1,146,186 + -0.3
1,146,280 + -1.7
1,146,332 + +0.3
1,146,370 + -0.0
1,146,410 + +0.2
1,146,424 + -1.5
1,146,516 - -1.4
1,146,528 + -0.0
1,146,581 + +0.3
1,146,596 - +2.0
1,146,610 + -0.3
1,146,666 + +0.6
1,146,829 + 8850 mRNA_482 0.39 -0.1
1,146,835 - 8850 mRNA_482 0.42 -0.1
1,146,836 + 8850 mRNA_482 0.42 +2.1
1,146,838 + 8850 mRNA_482 0.43 -0.1
1,146,849 - 8850 mRNA_482 0.47 +0.5
1,146,854 - 8850 mRNA_482 0.48 -1.3
1,146,861 - 8850 mRNA_482 0.51 -0.2
1,146,875 - 8850 mRNA_482 0.56 -0.7
1,146,890 - 8850 mRNA_482 0.61 +0.6
1,146,925 - 8850 mRNA_482 0.74 -0.3
1,146,962 + 8850 mRNA_482 0.87 +1.7
1,147,063 + -0.1
1,147,067 - +0.7
1,147,081 + -0.2
1,147,082 + +0.0
1,147,137 - +0.4
1,147,141 - +0.2
1,147,384 + -2.8
1,147,385 - +1.3
1,147,394 + +0.1
1,147,395 - -0.0
1,147,397 - -0.3
1,147,399 - +0.8
1,147,434 + +0.5
1,147,440 - +0.0
1,147,451 + -0.3
1,147,458 + +0.1

Or see this region's nucleotide sequence