Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_656

Experiment: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_656: 9024 - Hypothetical Protein, at 1,579,161 to 1,580,144 9024

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,578,170 + -0.8
1,578,309 - +0.3
1,578,319 + -1.5
1,578,554 + +0.1
1,579,357 + 9024 mRNA_656 0.20 +1.9
1,579,486 + 9024 mRNA_656 0.33 -0.8
1,579,641 + 9024 mRNA_656 0.49 -0.1
1,579,749 - 9024 mRNA_656 0.60 +2.5
1,579,775 + 9024 mRNA_656 0.62 +0.7
1,579,776 + 9024 mRNA_656 0.62 +3.3
1,579,783 - 9024 mRNA_656 0.63 -0.9
1,579,903 - 9024 mRNA_656 0.75 -0.3
1,579,915 - 9024 mRNA_656 0.77 +0.6
1,579,934 - 9024 mRNA_656 0.79 +0.5
1,579,939 + 9024 mRNA_656 0.79 -0.7
1,580,060 - -0.7
1,580,075 - -3.2
1,580,087 - +1.5
1,580,100 - -0.1
1,580,197 - +0.7
1,580,205 - +0.4
1,580,228 + +0.5
1,580,230 - -0.2
1,580,245 + -1.2
1,580,247 + +1.2
1,580,977 - +0.1
1,581,111 - -0.2
1,581,125 + -1.1

Or see this region's nucleotide sequence