Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2018

Experiment: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10385 and 10386 are separated by 703 nucleotides10386 and 10387 are separated by 280 nucleotides mRNA_2017: 10385 - K12600 SKI3, TTC37 superkiller protein 3, at 752,495 to 757,859 10385 mRNA_2018: 10386 - K09554 CDC37 cell division cycle protein 37, at 758,563 to 760,344 10386 mRNA_2019: 10387 - K07088 K07088 uncharacterized protein, at 760,625 to 762,571 10387

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
757,759 + +1.9
757,816 - +0.8
757,879 + -0.1
757,883 - +1.2
757,911 + +0.9
758,042 - +1.0
758,055 + +0.1
758,187 + -0.4
758,196 + +0.8
758,205 - +2.4
758,214 + +0.7
758,335 - +1.0
760,213 + -0.2
760,363 - -0.7
760,379 + -0.9
760,382 - +1.5
760,472 - +0.4
760,504 - -1.0
760,514 - -0.1
760,966 + 10387 mRNA_2019 0.18 -0.9
761,131 - 10387 mRNA_2019 0.26 +1.4
761,179 - 10387 mRNA_2019 0.28 +1.4
761,319 - 10387 mRNA_2019 0.36 +1.2

Or see this region's nucleotide sequence