Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2437

Experiment: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2437: 10805 - Hypothetical Protein, at 127,429 to 129,055 10805

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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126,896 + -0.3
128,348 - 10805 mRNA_2437 0.56 -3.0
128,396 + 10805 mRNA_2437 0.59 -1.9
128,518 + 10805 mRNA_2437 0.67 +0.2
128,521 - 10805 mRNA_2437 0.67 -0.5
128,523 - 10805 mRNA_2437 0.67 -0.3
128,708 + 10805 mRNA_2437 0.79 -1.1
128,794 - 10805 mRNA_2437 0.84 -0.9
128,825 - 10805 mRNA_2437 0.86 -0.3
128,839 - 10805 mRNA_2437 0.87 -0.7
128,847 + 10805 mRNA_2437 0.87 -0.6
128,985 - +1.4
129,002 + +0.0
129,017 - -2.5
129,128 - -1.6
129,149 + +1.0
129,181 - +0.2
129,190 + +0.4
129,304 - -0.1
129,309 + -0.1
129,311 + -0.5
129,321 - +0.6
129,324 - -0.7
129,342 - +1.3
129,345 - -0.6
129,360 - -1.1
129,423 + +1.1
129,428 - -0.0
129,453 - +0.7
129,455 + +0.3
129,458 - +1.0
129,520 + +0.2
129,546 - +1.1
129,547 + +2.4
129,558 + +2.6
129,595 - -0.7
129,605 + -0.0
129,621 - -0.3
129,624 - -0.1
129,624 + +0.9
129,624 - +0.6
129,638 - -0.4
129,668 + +0.1
129,711 - +1.3
129,718 - +0.7
129,731 + +0.4
129,857 - -0.3
129,893 - +2.2
129,921 - +0.7
129,935 + +0.4
129,943 - +1.3
130,010 - +0.4

Or see this region's nucleotide sequence